../../tmp/servers/virsirnadb/2071696985
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1724 | 1 | gcaacagttactgcgacgt | 19 | |
| NC_001526.2 | Human papillomavirus type 16, complete genome | 205 | ................... | 223 | 100 |
| NC_001526.2 | Human papillomavirus type 16, complete genome | 3196 | _.c..........______ | 3185 | 57 |
| NC_008032.1 | Capra hircus papillomavirus type 1, complete genome | 7242 | __...........g..___ | 7229 | 68 |
| NC_008032.1 | Capra hircus papillomavirus type 1, complete genome | 2712 | ____.........tt..t. | 2726 | 63 |
| NC_001838.1 | Common chimpanzee papillomavirus 1, complete genome | 3591 | _............______ | 3602 | 63 |
| NC_001838.1 | Common chimpanzee papillomavirus 1, complete genome | 3562 | __.........a.._____ | 3573 | 57 |
| NC_011530.1 | Caretta caretta papillomavirus 1, complete genome | 5840 | ______...........__ | 5850 | 57 |
| NC_011530.1 | Caretta caretta papillomavirus 1, complete genome | 4655 | .a.........a.______ | 4643 | 57 |
| NC_014469.1 | Gammapapillomavirus HPV127, complete genome | 4644 | ...ga........._____ | 4657 | 63 |
| NC_001690.1 | Human papillomavirus type 48, complete genome | 4837 | __.t.........._____ | 4848 | 57 |
| NC_004500.1 | Human papillomavirus type 92, complete genome | 1265 | __..........a._____ | 1276 | 57 |
| NC_008582.1 | Old World harvest mouse papillomavirus, complete genome | 5506 | .g.........._______ | 5495 | 57 |
| NC_008582.1 | Old World harvest mouse papillomavirus, complete genome | 1130 | _______..........__ | 1139 | 52 |
| NC_014956.1 | Human papillomavirus type 134, complete genome | 1408 | .a.........._______ | 1419 | 57 |
| NC_014953.1 | Human papillomavirus type 129, complete genome | 2851 | __..........t._____ | 2840 | 57 |
| NC_001457.1 | Human papillomavirus type 4, complete genome | 2749 | ____..........t.___ | 2738 | 57 |
| NC_001457.1 | Human papillomavirus type 4, complete genome | 3190 | _..........________ | 3199 | 52 |
| NC_001352.1 | Human papillomavirus - 2, complete genome | 1984 | ___..........______ | 1975 | 52 |
| NC_001356.1 | Human papillomavirus - 1, complete genome | 1505 | ____.........._____ | 1496 | 52 |
| NC_001356.1 | Human papillomavirus - 1, complete genome | 2551 | .........._________ | 2560 | 52 |
| NC_001523.1 | Deer papillomavirus, complete genome | 2590 | __.........._______ | 2599 | 52 |
| NC_001593.1 | Human papillomavirus type 53, complete genome | 6648 | _..........________ | 6639 | 52 |
| NC_003748.1 | Equus caballus papillomavirus - 1, complete genome | 7283 | ________.........._ | 7274 | 52 |
| NC_004194.1 | Equinus papillomavirus, complete genome | 7262 | ________.........._ | 7253 | 52 |
| NC_010107.1 | Bandicoot papillomatosis carcinomatosis virus type 1, complete genome | 36 | .........._________ | 27 | 52 |
| NC_010107.1 | Bandicoot papillomatosis carcinomatosis virus type 1, complete genome | 5329 | ___..........______ | 5338 | 52 |
| NC_010107.1 | Bandicoot papillomatosis carcinomatosis virus type 1, complete genome | 1205 | .a.........a.______ | 1217 | 57 |
| NC_010329.1 | Human papillomavirus type 88, complete genome | 2902 | ___..........______ | 2893 | 52 |
| NC_013117.1 | Francolinus leucoscepus papillomavirus 1, complete genome | 1348 | ________.........._ | 1357 | 52 |
| NC_001676.1 | Human papillomavirus 54, complete genome | 3726 | __.........._______ | 3717 | 52 |
| NC_001458.1 | Human papillomavirus type 63, complete genome | 4609 | ____.........._____ | 4618 | 52 |
| NC_006563.1 | Trichechus manatus latirostris papillomavirus 1, complete genome | 1406 | __.........._______ | 1415 | 52 |
| NC_006563.1 | Trichechus manatus latirostris papillomavirus 1, complete genome | 4240 | .........c.g.______ | 4252 | 57 |
| NC_011109.1 | Tursiops truncatus papillomavirus type 1, complete genome | 2216 | __.........._______ | 2207 | 52 |
| NC_011109.1 | Tursiops truncatus papillomavirus type 1, complete genome | 5018 | __.c..aa.........__ | 5004 | 63 |
| NC_001605.1 | Mastomys natalensis papillomavirus, complete genome | 7585 | ____..c.gt......... | 7599 | 63 |
| NC_015267.1 | Camelus dromedarius papillomavirus type 1, complete genome | 6717 | .........t.a.a.____ | 6703 | 63 |
| NC_013196.1 | Rattus norvegicus papillomavirus 1 EES-2009, complete genome | 4131 | .g.........a.______ | 4119 | 57 |
| NC_001678.1 | Rhesus monkey papillomavirus, complete genome | 6889 | _.c.........a._____ | 6901 | 57 |
| NC_001354.1 | Human papillomavirus type 41, complete genome | 3347 | .t.........a.______ | 3335 | 57 |